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Qatar Foundation Annual Research Forum Volume 2012 Issue 1
- Conference date: 21-23 Oct 2012
- Location: Qatar National Convention Center (QNCC), Doha, Qatar
- Volume number: 2012
- Published: 01 October 2012
201 - 250 of 469 results
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Gene regulatory network inference using information theoretic methods
Authors: Amina Noor, Erchin Serpedin, Hazem Nounou, Mohamed Nounou, Marwa Qaraqe, Lotfi Chouchane and Nady MohamedBackground & Objectives: Gene regulatory network inference is a problem of prime importance in the budding field of systems biology and bioinformatics. The process which uses the information present in the genes to produce functional gene products is termed gene expression, and it can be measured using the microarray technology. The scope of this work is to propose a series of information theoretic algorithms whi Read More
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Molecular epidemiology of human papillomavirus among Arab women in Qatar
Authors: Asha Elmi, Devendra Bansal, Asma Al-Thani, Afaf Al-Ansari, Nady Mohamed and Ali SultanObjectives: Human papillomavirus (HPV) is the most commonly known sexually transmitted agent. To date, few reports are available on the distribution of most prevalent and variant types of HPV in Arab women. Therefore, the aim of this study is to determine the age-specific distribution of HPV types among Arab women being subjected to routine pap smear tests in the State of Qatar. Methods: 1100 pap smears have bee Read More
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Non-acute responses of hematological and molecular markers to intermittent hypoxic exposure and physical exercise in hot environment
Background & Objectives: Both exercise and hypoxia acutely elicit changes in systemic growth factors and cytokines that mediate increases in erythropoiesis, angiogenesis and, perhaps, arteriogenesis. To what extent the down-stream responses to these interventions are inter-related is, as yet, unclear. A role for circulating micro RNAs (cmiRNAs) in the regulation of these processes is a novel prospect. Thus the aims of this s Read More
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Fetal and perinatal determinants of neonatal mortality in the State of Qatar: A PEARL study analysis
Background and Objective: The State of Qatar has achieved maternal, neonatal and perinatal survival rates which are comparable to many high income countries, both from the West and East. Our study aims to analyze fetal and perinatal determinants of Qatar's neonatal mortality rate (NMR) during 2011. Methodology: A PEARL Study (Perinatal Neonatal Outcomes Research Study in the Arabian Gulf), a joint collaborative Read More
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Evaluation of glycemic abnormalities in patients with Beta Thalassemia major using continous glucose monitoring system (CGMS) and oral glucose tolerance test (OGTT): A pilot study
Authors: Mohamed Abdeldaem Yassin, Ashraf Tawfiq Soliman and Ahmed Said AlawwaIntroduction: Both insulin deficiency and insulin resistance are reported in patients with β thalassemia major (BTM). The use of CGMS among the different methods for early detection of glycaemic abnormalities has not been studied thorough. The aims of this study are: 1. to detect glycemic abnormalities in young adults with BTM using fasting blood glucose (FBG), (OGTT), 72-h continuous glucose concentration by CGMS, and Read More
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Ethnic and gender differences in skin auto-fluorescence
Background: The AGE reader is a non-invasive device that measures tissue accumulation of advanced glycation endproducts (AGEs) through skin auto-fluorescence (AF) and gives prediction of cardiovascular risk. For the risk prediction, the AGE reader uses a single reference curve, for both females and males, obtained from Caucasian subjects. Based on these reference curves, clinical cut-offs for a low, medium and high AF Read More
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Endothelial dysfunction in morbidily obese young Qataris
Background & objectives: The prevalence of metabolic syndrome (MetS), including obesity, dyslipidemia, hyperglycemia and hypertension, associated with an increased predisposition to cardiovascular disease (CVD), is especially high in the Middle East, primarily amongst young Qataris. Both insulin resistance and endothelial dysfunction have been proposed to contribute to the pathogenesis of CVD in obese patients. Rec Read More
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Effect of social and environmental factors on the prevalence of autism in Qatar
More LessAutism spectrum disorders (ASD) are a group of neuro-developmental disabilities common in childhood characterized by impairments in social interaction, communication skills, and patterns of activities. Background: The symptoms of ASDs typically are present before age 3 years and often are accompanied by abnormalities in cognitive functioning, learning, attention, and sensory processing. A formal diagnosis is generally n Read More
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Early detection of peripheral neuropathy by examining virtual perception of lower extremity join position
Background: Diabetic peripheral neuropathy (DPN) is one of the most common complications of diabetes that affects nerve functions and may occur in 25% of patients with 10 or more years of diabetes and up to 50% with 20 years of diabetes. Patients with DPN experience a high incidence of injuries while walking and have a low level of perceived safety. In certain cases the impaired judgment - mainly due to impaired propri Read More
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Endothelial cells provide a niche for placental hematopoietic stem cell expansion
Authors: Christophe Raynaud and Arash RafiiUmbilical cord blood (UCB) is an attractive source of hematopoietic stem cells (HSCs). However, the number of HSCs in UBC remains limited and the attempts to amplify them in-vitro remain of poor efficiency. Several publications document amplification of HSC/progenitors with endothelial or mesenchymal cells, but the lack of homogeneity in culture conditions or HSC qualification impairs direct comparison of these results. Th Read More
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Dietary composition and postprandial inflammation: Implications for human health
Authors: Amanda Brown, Ken Olson and Mohammad KhaledInflammation, in general, has been found to be associated with many human health complications. Postprandial inflammation, provoked soon after ingesting a meal, is transient in duration, but with dreadful consequences on human health over a period of time depending on the compositions of the meal. However, many populations, particularly in the Western countries, are in a constant postprandial state, which is likely to initiat Read More
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Congenital and genetic disorders in the Sultanate of Oman: Genetic service needs assessment
By Anna RajabBackground and Objectives: In the past 40 years Oman has witnessed remarkable social and economic growth, which is best reflected in the well-organized and efficient healthcare system. It has been anticipated that a change in disease pattern would be brought about by improvement in the quality of life, comprehensive healthcare facilities and successful control of communicable diseases. Although genetic and congenital dis Read More
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Cloning, overexpression and molecular characterization of human mast cell carboxypeptidase A
Authors: Sayed Kamel Goda, Aref Kyyaly, Asia Al-Jabiry, Andrew Walls and Muhammad Al SayrafiBackground: Mast cell proteases represent major protein components of secretory granules. The proteases are classified into a chymases, tryptases and carboxypeptidase (hMC-CPA). Little is known about the function of human lung carboxypeptidase A (hMC-CP) except for its ability to cleave angiotensin I. This suggests that the human mast cell carboxypeptidase A may play a role in the hypertension disease. Objectives Read More
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Genome-wide association study of prostate cancer in Arab populations: Identification of three genomic regions with multiple consecutive prostate cancer susceptibility loci
Background: Prostate cancer is the most common malignancy in many industrialized countries and the second cause of cancer-related death in Europe and the United States. The incidence of the disease has been increasing in Arab populations. Large databases focused on genetic susceptibility to prostate cancer have been accumulated from population studies of different ancestries, including Europeans and Africa Read More
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Chest injury among young population in Qatar
Background: Traumatic chest injury (TCI) constitutes quarter of trauma-related deaths worldwide. Objective: To identify the pattern and outcome of TCI in Qatar in relation to age. Methods: Data were collected from all patients who sustained TCI between January 2008 and December 2010 in Qatar. Patients were classified and analyzed in 3 age groups (group 1 <18, group 2 between 18 and 45 and group 3 above 45 years). Th Read More
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Application of PCC and M-FISH assays to detect biomarkers-and stage specificity-of cancer of different origins and to improve cancer therapy regimens
Authors: Firouz Darroudi and Michael LongBackground: Cytogenetics of solid tumors in general is negatively affected by culturing artifacts such as preferential clonal expansion and introduction of chromosomal rearrangements, thus making it difficult to discriminate between primary changes and secondary events. Considering that chromosomal instability is a hallmark of cancer even at the precursor cancer level, it is of a great importance to devise a method o Read More
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Cultural aspect of pedestrian injuries amongst expat workers in Qatar: An opportunity for an injury prevention program
Background: In the State of Qatar, the majority of workers are expatriates from different ethnicity and culture. Most of them are liable to pedestrian motor vehicle crashes (MVC). We sought to understand the anatomy, time and date of injuries amongst expat workers in relation to their country of origin, culture and traditions. Methods: Retrospective analysis of prospectively collected data obtained from trauma registry Read More
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Acute effects of blood transfusion on pituitary gonadal axis and sperm parameters in young males with sickle cell disease (SCD): A pilot study
Objective: To evaluate semen parameters and measure serum follicle-stimulating hormone (FSH), luteinizing hormone (LH), and testosterone (T) concentrations before and 7 days after packed red cell transfusion (PCTx) in adults with sickle cell disease (SCD). Methods: This prospective study investigated 18 young adults with transfusion-dependent SCD, aged 20.7 +/- 2.88 years, with full pubertal development (Tanner's stage Read More
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Prognosis of neurogenic dysphagia by neuromuscular electric stimulation (NMSE) therapy versus NMSE coupled with conventional swallowing training in subacute cases in Qatar
Authors: Amal Idres Ahmad and Mohmad Sajed HusainTo study the effects of VitalStim therapy coupled with conventional swallowing training on recovery of neurogenic dysphagia, a total of 30 dysphagia patients were randomly selected among subacute post-traumatic brain injury and cerebrovascular accident cases. The cases were evenly divided into two groups: neuromuscular electric stimulation (NMSE) group, and NMSE plus conventional swallowing therapy group Read More
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Investigating poly (ADP-ribose) polymerase-1 (PARP-1) activation in obesity associated DNA damage and pro-inflammatory senescence
Authors: Houari Boumediene Abdesselem, Aisha Madani and Nayef MazloumObesity has increased at an alarming rate over the past three decades. It is likely to be caused by increased caloric intake combined with genetic predisposing factors and is a major risk factor for type 2 diabetes (T2D) and cardiovascular disorders. Obesity is linked to chronic inflammation, which was proposed as a cause for insulin resistance and T2D. However, the molecular mechanism of obesity driven T2D still lacks know Read More
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Public attitudes towards participation in Biobank Qatar
Authors: Eman Nasrella and Brian ClarkBackground and Objectives: Biobank Qatar is a research enabling infrastructure requiring members of the Qatari public to donate health and lifestyle information coupled to biological samples to enable research towards better prevention, diagnosis and treatment of diseases common in Qatar. Building a biobank depends on the willing participation of the public. Recruitment of participants requires insight into public knowl Read More
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STIM1 phosphorylation in Xenopus oocytes during meiosis
Authors: Maya Dib and Khaled MachacaStromal interaction molecule 1 (STIM1), the ER calcium sensor, couples to Orai1, the calcium channel, and mediates store-operated calcium entry (SOCE). STIM1 localizes to the ER membrane. Following Ca²+ store depletion, STIM1 forms puncta that localize to the cortical ER and binds Orai1 to allow Ca²+ influx. The egg's competency to activate at fertilization is dependent on its ability to generate a fertilization-specific Ca2+ tra Read More
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Photodynamic therapy for hair removal
Authors: Mohamed Ali, Amr Zaher, Carmen Ali and Khalid A. Al-SaadBackground: Unwanted hair is one of the most common medical problems affecting women of reproductive age inducing a lot of psychological stress and threatening their femininity and self-esteem. Old methods of removing unwanted hair include shaving, waxing, chemical epilation, and electrolysis, all of which have temporary results. However laser-assisted hair removal is the most efficient method of long-term hair rem Read More
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PCA3 molecular urine test: Development of an easy and cheap assay of a potential use in the diagnosis of prostate cancer.
Background: The use of the serum prostate-specific antigen (PSA) test for prostate cancer screening has resulted in a diagnostic dilemma: PSA is not prostate cancer specific and could be found in the normal prostate at equal or higher levels than is found in prostate cancer. Prostate cancer gene 3 (PCA3) encodes a prostate-specific mRNA with a median 66-fold up-regulation compared to adjacent benign tissue. In contrast, P Read More
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Determination of titanium and copper by ICP-MS in rat tissues after oral administration of nanoparticles
Authors: Mohamed A. Amr and Najat AljufairiIn this study, the high sensitive ICP-MS was employed to detect the contents of titanium and copper in liver, lung, spleen, kidney, heart, testis, brain and blood after administering an acute dose of different nano particle sizes of titanium and copper to rats by a syringe via gastrointestinal tract. In coupling with pathological examinations, the target organs of nano- and micro-copper were successfully determined. Biodistribution exp Read More
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An innovative thermometric "Stress Test" for early diagnosis of acute charcot
Background & Objectives: Charcot neuroarthropathy (CN) is a devastating complication of diabetes. It has two-fold higher rate of major amputation compared to those without CN. Unfortunately, to date, there is no pathological marker or diagnostic criterion for it and diagnosis relies on pattern recognition and clinical intuition. Not surprisingly, the diagnosis can be missed up to 95% of the time and the average diagnostic delay h Read More
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Association between obesity, cardiometabolic disease biomarkers and innate immunity-related inflammation: Relevance of vitamin D.
Background and Objectives: Obesity is associated with a state of chronic inflammation and increased cardiometabolic disease risk. The present study examined the relationship between body mass index (BMI) and cardiometabolic and inflammatory biomarkers among normal weight, overweight, and obese subjects. Methods: Subjects (n = 1,805, aged 18 to 79 years) from Canada were examined for associations betw Read More
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Cellular senescence as a tumor suppressor mechanism is mediated by sequential activation of the p53 and RB pathways
Authors: Naima Al Mulla, Zafar Nawaz and Raya SaabBackground and Objectives: Oncogene induced senescence is a tumor suppressor mechanism that limits progression of pre-malignant lesions. Identifying the molecular mechanisms by which cells can escape senescence may provide novel cancer therapeutic and preventive targets. Two tumor suppressors, p53 and Rb, are involved in senescence, but their specific roles are still unclear. Our aim is to investigate the role of Read More
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"Ca2+ funneling": Functional coupling between SOCE, SERCA and IP3 receptors enhances Ca2+ signaling efficiency in activating the Ca2+-activated Cl channels as downstream effectors.
Authors: Raphael Courjaret and Khaled MACHACAStore-operated calcium entry (SOCE) is a ubiquitous Ca2+ influx pathway leading to a sustained, low amplitude Ca2+ signal that activates multiple physiological process including gene transcription and secretion, and contributes to store refilling. We here describe a novel mechanism, that we call "Ca2+ funneling", which allows efficient activation by SOCE of Calcium-activated chloride channels (CaCl2) in the xenopus oocyte to Read More
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A pilot study of diagnosed and undiagnosed type 2 diabetic patients in Qatar
Background and Objectives: The prevalence of type 2 diabetes (T2D) in Qatar is the highest in the world. It is estimated that about one quarter of the T2D patients in Qatar are still undiagnosed. We set out to examine determinants of pre-diabetes (PD) or undiagnosed T2D (UT2D). Furthermore, we examined risk factors for glucose regulation in patients with known T2D. Methods: We examined 178 patients with known T2D and 1 Read More
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Metformin regulates hyperglycemia-induced vascular senescence through SIRT1
Authors: Gnanapragasam Arunachalam, Samson M Samuel, Isra Marei, Hong Ding and Chris R TriggleBackground and Objective: Vascular aging is associated with changes in the structure and function of the vascular system and such changes contribute to the risk for the development of diabetes and associated cardiovascular diseases. Vascular senescence reflects the limited ability of vascular cells to divide and proliferate and is accompanied by specific phenotypic changes in morphology, gene expression and function Read More
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Tunneling nanotubes mediate preferential transfer of mitochondria from endothelial to cancer cells and confer chemoresistance
Many tumors are regulated by complex interactions with cellular components of the microenvironment including mesenchymal stem cells (MSC) or endothelial cells (ECs). While the role of receptor-ligand interaction at the cell surface is well documented, direct cell-to-cell contact has not been clearly established. Recently, tunneling nanotubes (TnTs) have been shown to support cell-to-cell transfer of organelles, various plasma Read More
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Biobank Qatar: Implementation and initial results
Authors: Elio Riboli and Paul ElliottBiobank Qatar aims to establish a large national bioresource that will support the development of cutting edge medical research during the next decades. While the design of Biobank Qatar has similarities with other large-scale population-based prospective cohort studies established in other parts of the world, it is unique in the region and excels for its highly innovative scientific and technological features. Biobank Qatar will in Read More
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Epidemiology of football injuries in Asia: A prospective study in Qatar
Authors: Cristiano Eirale, Abdulaziz Farooq, Faten Smiley, Johannes Tol and Hakim ChalabiObjectives: To investigate the incidence, characteristics and patterns of football injuries at club level in Qatar. Design: Prospective cohort study. Methods: Data were prospectively collected from the first division football league clubs in Qatar, in accordance with the international consensus statement on football injury epidemiology. An injury was defined as any physical complaint sustained during football activity resulting in t Read More
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Evidence for a cell fate refinement mechanism in sensory neurons
Authors: Ishmail Abdus-Saboor and Benjamin ShykindThe olfactory receptors (ORs), which are G-protein coupled receptors, number more than 1,000 and comprise the largest gene family in the mammalian genome. ORs are expressed both monogenically and monoallelically in olfactory sensory neurons (OSNs) and the mechanism that controls their regulation is largely unknown. ORs reside in constitutive heterochromatin and selection of one OR and from one allele occ Read More
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Bioinformatic parallel processing tools development for mutation identification from whole exome data following homozygosity mapping for autosomal recessive disorders
Authors: Yasser Al-Sarraj, Adel Abouzehry, Hatem El-Shanti and Marios KambourisEight consanguineous Arab families with novel autosomal recessive disorders were mapped with illumina 700K SNP. All relevant positional candidate genes were screened for pathogenic mutations. None were identified. Multiple homozygosity intervals were obtained for each family since no significant LOD scores were possible. Whole exome sequencing was on ABI SOLiD4 for 1 affected individual from each family. M Read More
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Novel pyridinium-based cationic lipids as gene delivery vectors
Background: For the past two decades, cationic lipids have remained one of the most widely used non-viral gene delivery vectors due in large to their safety and ease of use despite having low efficiency. We and others believe that the key to improving the effectiveness of non-viral agents is unlocking the still unsolved mechanism behind lipid gene delivery. Our objective is the rational design, synthesis and evaluation of the D Read More
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Adipokines as mediators of components of metabolic syndrome in a Qatari population
Background and Objectives: There is a high prevalence of obesity and its co-morbidities within the Arab population, especially in Qatar. Furthermore, the younger age of onset of obesity and its preponderance amongst females have seen an increase in type 2 diabetes and cardiovascular disease in this cohort. Adipose tissue dysfunction preceding frank obesity may underlie the increased risk of metabolic sy Read More
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Akt-activated endothelial cells enhance self-renewal, stemness, resistance to therapy, and metastasis in breast cancer
Authors: Pegah Ghiabi, Jennifer Pasquier, Bella Guerrouahen and Arash Rafii TabriziRecently, the role of tumor microenvironment (niche) in regulating cancer progression has been indicated. Tumor microenvironments consists of tumor vasculature, bone marrow mesenchymal stem cells, immune cells and the components of the extracellular matrix. It is believed that the phenotypic advantages acquired by tumor cells are partly the outcome of their interaction with their niche. Endothelial cells are the buil Read More
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Identification of molecular pathways implicated in the metastasis process in a mouse model of lung adenocarcinoma
Authors: Mouaadh Abdelkarim, Supria Gerardine, Rufayda Marmar, Omar Kallas, Hamid Massaeli and Nasrin MesaeliA global survey of cancer has shown that lung cancer is the most common cause of the new cancer cases and cancer deaths in both men and women worldiwide. In Qatar a recent retrospective study based on a cohort of patient registry of Al Amal Cancer Hospital from 1991-2006, showed that lung cancer and lumph node cancer are the major cancers in men (5.9%, incident rate per 100,000) while in women breast cancer Read More
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Epigenetic changes in beta cells related to high glucose
Background & Objectives: Epigenetic changes include two types of changes DNA methylation and Histone modifications. These modifications are influenced by the change in various environmental factors resulting in a stable form of gene expression changes. Type II Diabetes incidence keeps rising with so little understanding of the actual cause at gene expression level despite the massive amount of research around the subje Read More
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The relative risk of road mortality (RRRM) in Qatar
Authors: Rafael Consunji, Ruben Rosario Peralta, Hassan Al Thani and Rifat LatifiBackground and Objectives: The epidemiology of road deaths in Qatar has not been fully described. This study will analyze and compare the age-specific death rates from motor vehicle crashes (MVC's) and make recommendations for targeted injury prevention programs for road safety in Qatar. Method: Data from the Qatar Statistic Authority (QSA), for the year 2010 was collected and analyzed. All deaths classified as "mot Read More
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Inhibition of NFκB signaling in calreticulin deficient cells
Calreticulin (CRT) is an endoplasmic reticulum (ER) Ca²+ binding chaperone, which regulates many of cellular processes. Previous work from our lab showed loss of CRT leads to increased resistance to apoptosis. We also showed loss of CRT leads to increased AKT phosphorylation and activation of the proteosome activity. Thus we hypothesized that in the absence of CRT function, NFκB signaling is activated leading to e Read More
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SID-MRM-MS enabled verification of biomarkers of type 2 diabetes in a Qatari population
Authors: Prabhjit Kaur, Nasser M Rizk, Noura Younes, Mahmoud Zirie and Amrita K CheemaBackground and Objectives: Recent technological advancements in liquid chromatography coupled with high resolution mass spectrometry have facilitated clinical biomarker discovery, verification and validation. Targeted metabolic profiling refers to the precise quantitative measurements of metabolites for validation of markers identified via untargeted metabolomics. Specifically, multiple reaction monitoring mass spectrome Read More
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Fuzzy-QFD approach to quality assurance in pediatric services in public and private hospitals in Qatar
Authors: Hana Yousef Al-Shouli and Mohd Nishat FaisalBackground and objectives: This study was conducted to understand the dimensions important for quality assurance in pediatric services of public and private hospitals in Qatar. Method: The study employed Fuzzy- Quality Function Development (Fuzzy-QFD) approach to translate the patients expectations into appropriate service specifications and to perform assessments of the existing processes. The importance of this tool li Read More
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Targeting microRNAs offers a new therapeutic approach for the treatment of diabetes-related cardiovascular disease
Authors: Hala Omar, Isra Marei, Gnanapragasam Arunachalam, Samson M. Samuel, Christopher Triggle and Hong DingBackground and Objectives: The World Health Organization states that cardiovascular disease is the leading cause of death worldwide. The increasing prevalence of obesity and diabetes indicate that cardiovascular disease will remain a major health concerns for decades to come. The Gulf States including Qatar, the Middle East and the North African (MENA) region as whole, but also elsewhere in the world, face a pande Read More
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Relationships between anthropometric factors and repeated-sprint ability in the Qatar national soccer team
Background & Objectives: Muscle mass is a major determinant of power development during maximal sprinting. The ability to recover and subsequently reproduce high-intensity efforts (termed repeated-sprint ability, RSA) is closely related to match-performance in soccer. The aim of this study is to assess any relationship between anthropometric parameters and RSA performance in a national soccer team in the Middl Read More
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Point prevalence survey of antibiotic utilization in oncology patients
Authors: Sara Hayder Ahmed, Arwa Hammuda, Emily Kathleen Black and Shereen ElAzzazyBackground & Objectives Point Prevalence Surveys (PPS) are used internationally for identifying antibiotic prescribing practices and evaluating antibiotic stewardship programs. The objectives of this study are to develop a PPS tool to be used in Qatar, to determine prevalence of antibiotic consumption in the National Center for Cancer Care and Research (NCCCR) inpatient population, and to characterize antibiotic prescribi Read More
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The effect of graded hypoxia on the development of neuromuscular fatigue during maximal intermittent dynamic leg extensions
Authors: Ryan Christian, Olivier Girard, Francois Billaut and David BishopHypoxia has been shown to exacerbate the performance loss during Maximal Intensity Intermittent Exercise (MIIE). However, the effect of hypoxia on the development of central and peripheral mechanisms of fatigue during MIIE is unknown. The aim of the study is to explore the development of both central and peripheral fatigue during multiple bouts of MIIE under varying severity levels of hypoxia. On separate days, 14 healthy Read More
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Effects of lipotoxicity and diabetes on hepatocyte function
Authors: Alhasan Sedeeq, Mohamed Al Hajri, Mennatallah Omar, Isra Marei, Christopher Triggle and Hong DingBackground and Objectives: Obesity is a major risk factor for the development of liver disease and diabetes and there is currently a pandemic of diabetes that is associated with a very high incidence of non-alcoholic fatty liver disease and consequent deregulation of liver function. The overall objective of this project is to determine whether non-alcoholic fatty liver disease and hyperglycemia affect calcium homeostasis via alter Read More
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