1887
Volume 2013, Issue 1
  • E-ISSN: 2223-506X

ملخص

This article is an introduction to a new approach to first principles electronic structure calculation. The starting point is the Hartree-Fock-Roothaan equation, in which molecular integrals are approximated by polynomials by way of Taylor expansion with respect to atomic coordinates and other variables. It leads to a set of polynomial equations whose solutions are eigenstate, which is designated as algebraic molecular orbital equation. Symbolic computation, especially, Gröbner bases theory, enables us to rewrite the polynomial equations into more trimmed and tractable forms with identical roots, from which we can unravel the relationship between physical parameters (wave function, atomic coordinates, and others) and numerically evaluate them one by one in order. Furthermore, this method is a unified way to solve the electronic structure calculation, the optimization of physical parameters, and the inverse problem as a forward problem.

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References

  1. Bussei-Kenkyu, 2012;1(3):013103. In Japanese. Available at: http://bussei-kenkyu.jp/pdf/01/3/0030-013101.pdf
  2. Szabo A, Ostlund NS. Modern Quantum Chemistry: Introduction to Advanced Electronic Structure Theory. New York: Dover Publications 1996;
    [Google الباحث العلمي]
  3. Marx D, Hutter J. Ab Initio Molecular Dynamics: Theory and Implementation. Modern Methods and Algorithms of Quantum Chemistry, Vol. 1. 2nd ed 2000;:329477
    [Google الباحث العلمي]
  4. McLean AD, Yoshimine M. Tables of linear molecule wavefunctions. IBM J Res Dev. Supplement. 1967; 12::206
    [Google الباحث العلمي]
  5. Yasui J, Saika A. J Chem Phys. 1982; 76::468
    [Google الباحث العلمي]
  6. Yasui J, Bull Soc Discrete Variational Xα. In Japanese. 2009; 22:1,2:711
    [Google الباحث العلمي]
  7. Yasui J. Polynomial expressions of molecular integrals functionals over Slater-type-orbitals and its application to the extension of Hartree-Fock-Roothaan equation. Bull Soc Discrete Variational Xα. In Japanese. 2010; 23:1,2:5459
    [Google الباحث العلمي]
  8. Yasui J. Algebraic molecular orbital equation. Bull Soc Discrete Variational Xα. In Japanese. 2011; 23:1,2:4754
    [Google الباحث العلمي]
  9. Yasui J, to be published in Progress in Theoretical Chemistry and Physics, 2012, Springer
  10. Symbolic computation software Mathematica, http://www.wolfram.com
  11. Decker W, Greuel GM, Pfister G, Schoenemann H, Computer algebra system SINGULAR , http://www.singular.uni-kl.de/
  12. Möller HM. On decomposing systems of polynomial equations with finitely many solutions. Appl Algebra Engrg, Comm Comput. 1993; 4:4:217230
    [Google الباحث العلمي]
  13. Lazard D. Solving zero-dimensional algebraic systems. J Symbolic Comput. 1992; 13:2:117131. Available at: http://dx.doi.org/10.1016/S0747–7171(08)80086-7
    [Google الباحث العلمي]
  14. Sottile F, Eisenbud D, Grayson DR, Stillman M, Sturmfels B. Computations in algebraic geometry with Macaulay 2. Vol. 8. Berlin, Heidelberg, New York: Springer-Verlag 2001;:101130. Algorithms and Computations in Mathematics
    [Google الباحث العلمي]
  15. Cox DA, Little J, O'Shea D. Using Algebraic Geometry. 2nd ed. Berlin: Springer 2005;
    [Google الباحث العلمي]
  16. Barnett MP, Capitani JF, von zur Gathen J, Gerhard J. Symbolic calculation in chemistry: selected examples. Int J Quantum Chem. 2004; 100:2:80104
    [Google الباحث العلمي]
  17. Dewar MJS, Zoebisch EG, Healy EF, Stewart JJP. Development and use of quantum mechanical molecular models. 76. AM1: a new general purpose quantum mechanical molecular model. J Am Chem Soc. 1985; 107:13:39023909
    [Google الباحث العلمي]
  18. Stewart JJP. Optimization of parameters for semiempirical methods I. Method. J Comput Chem. 1989; 10:2:209220
    [Google الباحث العلمي]
  19. Brickenstein M. Reports on computer algebra. University of Keiserslautern, Center for Computational algebra, 2005(35). http://www.mathematik.uni-kl.de/∼zca/Reports_on_ca/35/paper_35_full.ps.gz
  20. Lichtblau D. Applications of Computer Algebra. Symbolic and Numeric Computation session. Linz, Austria, July 27–30;2008. http://downloads.hindawi.com/isrn/cm/aip/352806.pdf
  21. Arnold EA. Modular algorithms for computing Gröbner bases. J Symbolic Comput. 2003; 35:4:403419
    [Google الباحث العلمي]
  22. Yassen R, Algarni M. The three-center hybrid and four-center electron repulsion integrals over Slater type orbitals using Guseinov rotation-angular function. Int J Contemp Math Sci. 2012; 7:39:19031907
    [Google الباحث العلمي]
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